- Class: 2
- Architecture: 2.40:Beta Barrel
- Topology: 2.40.20:Plasminogen Kringle 4
- Homology: 2.40.20.10:Plasminogen Kringle 4
PDB Entries
PDB ID | OPM | Mutant | Chain Formula | Resolution | HETNAM | |||
---|---|---|---|---|---|---|---|---|
Amino Acid sequence | SCOPe Family Level | CATH Homology Level | ||||||
1a0h | [A2B2] | [A2B2] | [A2B2] | 3.2 | 0G6:D-PHENYLALANYL-N-[(2S,3S)-6-{[AMINO(IMINIO)METHYL]AMINO}-1-CHLORO-2-HYDROXYHEXAN-3-YL]-L-PROLINAMIDE NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
1b2i | [A] | [A] | [A] | NOTAPPLICABLE. | AMH:TRANS-4-AMINOMETHYLCYCLOHEXANE-1-CARBOXYLIC ACID | |||
1bht | [A2] | [A2] | [A2] | 2 | EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID SO4:SULFATE ION | |||
1cea | [A] | [A] | [A] | 2.06 | ACA:6-AMINOHEXANOIC ACID | |||
1ceb | [A] | [A] | [A] | 2.07 | AMH:TRANS-4-AMINOMETHYLCYCLOHEXANE-1-CARBOXYLIC ACID | |||
1gmn | [A2] | [A2] | [A2] | 2.3 | EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID IDS:2-O-SULFO-ALPHA-L-IDOPYRANURONIC ACID SGN:2-DEOXY-6-O-SULFO-2-(SULFOAMINO)-ALPHA-D-GLUCOPYRANOSE | |||
1gmo | [A2] | [A2] | [A2] | 3 | EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID IDS:2-O-SULFO-ALPHA-L-IDOPYRANURONIC ACID SGN:2-DEOXY-6-O-SULFO-2-(SULFOAMINO)-ALPHA-D-GLUCOPYRANOSE SO4:SULFATE ION | |||
1gp9 | [A2] | [A2] | [A2] | 2.5 | EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | |||
1hpj | [A] | [A] | [A] | NOTAPPLICABLE. | ||||
1hpk | [A] | [A] | [A] | NOTAPPLICABLE. | ACA:6-AMINOHEXANOIC ACID | |||
1i5k | [A2B2] | [A2B2] | [A2B2] | 2.7 | ||||
1i71 | [A] | [A] | [A] | 1.45 | SO4:SULFATE ION | |||
1jfn | [A] | [A] | [A] | NOTAPPLICABLE. | ||||
1kdu | [A] | [A] | [A] | NOTAPPLICABLE. | ||||
1ki0 | [A] | [A] | [A] | 1.75 | BCN:BICINE | |||
1kiv | [A] | [A] | [A] | 2.1 | ||||
1krn | [A] | [A] | [A] | 1.67 | SO4:SULFATE ION | |||
1nk1 | [A2] | [A2] | [A2] | 2.5 | ||||
1nl1 | [A] | [A] | [A] | 1.9 | CA:CALCIUM ION CGU:GAMMA-CARBOXY-GLUTAMIC ACID NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
1nl2 | [A] | [A] | [A] | 2.3 | CA:CALCIUM ION CGU:GAMMA-CARBOXY-GLUTAMIC ACID CL:CHLORIDE ION LPS:O-{HYDROXY[((2R)-2-HYDROXY-3-{[(1S)-1-HYDROXYPENTADECYL]OXY}PROPYL)OXY]PHOSPHORYL}-L-SERINE NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
1pk2 | [A] | [A] | [A] | NOTAPPLICABLE. | ACA:6-AMINOHEXANOIC ACID | |||
1pk4 | [A] | [A] | [A] | 1.9 | SO4:SULFATE ION | |||
1pkr | [A] | [A] | [A] | 2.48 | CL:CHLORIDE ION | |||
1pmk | [A] | [A] | [A] | 2.25 | ||||
1pml | [A] | [A] | [A] | 2.38 | CL:CHLORIDE ION | |||
1tpk | [A] | [A] | [A] | 2.4 | CL:CHLORIDE ION | |||
1urk | [A] | [A] | [A] | NOTAPPLICABLE. | FUC:ALPHA-L-FUCOPYRANOSE | |||
2doh | [AB] | [AB] | [AB] | 2.3 | DIO:1,4-DIETHYLENE DIOXIDE | |||
2doi | [AB] | [AB] | [AB] | 3.1 | ||||
2fd6 | [ABCD] | [A2BC] | [A2BC] | 1.9 | EDO:1,2-ETHANEDIOL ETX:2-ETHOXYETHANOL FUC:ALPHA-L-FUCOPYRANOSE NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE NDG:2-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE PG4:TETRAETHYLENE GLYCOL PGE:TRIETHYLENE GLYCOL SO4:SULFATE ION | |||
2feb | [A] | [A] | [A] | NOTAPPLICABLE. | ||||
2hpp | [ABC] | [ABC] | [ABC] | 3.3 | 0G7:D-PHENYLALANYL-N-[(3S)-6-CARBAMIMIDAMIDO-1-CHLORO-2-OXOHEXAN-3-YL]-L-PROLINAMIDE | |||
2hpq | [ABC] | [ABC] | [ABC] | 3.3 | 0G7:D-PHENYLALANYL-N-[(3S)-6-CARBAMIMIDAMIDO-1-CHLORO-2-OXOHEXAN-3-YL]-L-PROLINAMIDE | |||
2i9a | [A] | [A] | [A] | 1.9 | PO4:PHOSPHATE ION | |||
2i9b | [AB] | [AB] | [AB] | 2.8 | BMA:BETA-D-MANNOPYRANOSE NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE SO4:SULFATE ION | |||
2k4r | [A] | [A] | [A] | NOTAPPLICABLE. | ||||
2k51 | [A] | [A] | [A] | NOTAPPLICABLE. | ||||
2kj4 | [AB] | [AB] | [AB] | NOTAPPLICABLE. | ||||
2knf | [A] | [A] | [A] | NOTAPPLICABLE. | ||||
2l0s | [A] | [A] | [A] | NOTAPPLICABLE. | ||||
2pf1 | [A] | [A] | [A] | 2.8 | ||||
2pf2 | [A] | [A] | [A] | 2.2 | CA:CALCIUM ION CGU:GAMMA-CARBOXY-GLUTAMIC ACID | |||
2pk4 | [A] | [A] | [A] | 2.25 | ACA:6-AMINOHEXANOIC ACID | |||
2qj2 | [A2] | [A2] | [A2] | 1.81 | SO4:SULFATE ION | |||
2qj4 | [A2] | [A2] | [A2] | 2.5 | SO4:SULFATE ION | |||
2spt | [A] | [A] | [A] | 2.5 | CGU:GAMMA-CARBOXY-GLUTAMIC ACID NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE SR:STRONTIUM ION | |||
3bt1 | [ABC] | [ABC] | [ABC] | 2.8 | MAN:ALPHA-D-MANNOPYRANOSE NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
3bt2 | [ABCDE] | [ABCDE] | [A2BCD] | 2.5 | NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
3e6p | [AB] | [AB] | [AB] | 2.1 | DFK:D-PHENYLALANYL-N-[(1S)-4-{[(Z)-AMINO(IMINO)METHYL]AMINO}-1-(CHLOROACETYL)BUTYL]-L-PROLINAMIDE NA:SODIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE SO4:SULFATE ION | |||
3hn4 | [A] | [A] | [A] | 2.6 | EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID MPD:(4S)-2-METHYL-2,4-PENTANEDIOL SO4:SULFATE ION | |||
3k65 | [AB] | [AB] | [AB] | 1.85 | BU1:1,4-BUTANEDIOL | |||
3kiv | [A] | [A] | [A] | 1.8 | ACA:6-AMINOHEXANOIC ACID | |||
3laq | [AB] | [AB] | [AB] | 3.2 | NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
3mkp | [A2] | [A2] | [A2] | 2.81 | EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID IDS:2-O-SULFO-ALPHA-L-IDOPYRANURONIC ACID SGN:2-DEOXY-6-O-SULFO-2-(SULFOAMINO)-ALPHA-D-GLUCOPYRANOSE SO4:SULFATE ION | |||
3nxp | [A] | [A] | [A] | 2.2 | GOL:GLYCEROL NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | |||
3sp8 | [A2] | [A2] | [A2] | 1.86 | MES:2-(N-MORPHOLINO)-ETHANESULFONIC ACID MPD:(4S)-2-METHYL-2,4-PENTANEDIOL MRD:(4R)-2-METHYLPENTANE-2,4-DIOL SO4:SULFATE ION | |||
3u73 | [AB] | [AB] | [AB] | 3.19 | MAN:ALPHA-D-MANNOPYRANOSE NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
4a5t | [A] | [A] | [A] | 3.49 | CL:CHLORIDE ION GAL:BETA-D-GALACTOPYRANOSE NGA:2-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE SIA:N-ACETYL-ALPHA-NEURAMINIC ACID | |||
4bv5 | [A] | [A] | [A] | 2.1 | 5C3:4-(AMINOMETHYL)-N-(BENZENESULFONYL)CYCLOHEXANECARBOXAMIDE | |||
4bv7 | [A] | [A] | [A] | 1.7 | ACT:ACETATE ION BV7:3-(4-PIPERIDYL)PROPANOIC ACID | |||
4bvc | [A] | [A] | [A] | 1.6 | BV5:3-(4-PIPERIDYL)-N-[2-(TRIFLUOROMETHOXY)PHENYL]SULFONYL-PROPANAMIDE CL:CHLORIDE ION PEG:DI(HYDROXYETHYL)ETHER | |||
4bvd | [A] | [A] | [A] | 1.68 | BU6:5-CHLORO-2-FLUORO-N-[1-(4-PIPERIDYL)PYRAZOL-4-YL]BENZENESULFONAMIDE CL:CHLORIDE ION | |||
4bvv | [A] | [A] | [A] | 1.8 | CPF:1-CYCLOPROPYL-6-FLUORO-4-OXO-7-PIPERAZIN-1-YL-1,4-DIHYDROQUINOLINE-3-CARBOXYLIC ACID SO4:SULFATE ION | |||
4bvw | [A] | [A] | [A] | 2 | CL:CHLORIDE ION EDO:1,2-ETHANEDIOL HKY:1,2,3,4-TETRAHYDROISOQUINOLINE-6-CARBOXYLICACID | |||
4cik | [A] | [A] | [A] | 1.78 | XO3:5-[(2R,4S)-2-(PHENYLMETHYL)PIPERIDIN-4-YL]-1,2-OXAZOL-3-ONE | |||
4d3c | [ABC] | [ABC] | [A2B] | 2.62 | ||||
4dur | [A] | [A] | [A] | 2.45 | ACT:ACETATE ION BCT:BICARBONATE ION CL:CHLORIDE ION GAL:BETA-D-GALACTOPYRANOSE K:POTASSIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE SIA:N-ACETYL-ALPHA-NEURAMINIC ACID | |||
4hzh | [A] | [A] | [A] | 3.3 | NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
4iua | [A] | [A] | [A] | 3.05 | EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID SO4:SULFATE ION | |||
4kiv | [A] | [A] | [A] | 2.2 | ||||
4nzq | [A] | [A] | [A] | 2.81 | NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
4o03 | [A] | [A] | [A] | 3.38 | CA:CALCIUM ION CGU:GAMMA-CARBOXY-GLUTAMIC ACID NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
5coe | [A2] | [A2] | [A2] | 2.18 | EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | |||
5cp9 | [A2] | [A2] | [A2] | 1.9 | 6O5:3-(FURAN-2-YL)PROPANOIC ACID EDO:1,2-ETHANEDIOL | |||
5cs1 | [A2] | [A2] | [A2] | 2 | ||||
5cs3 | [A2] | [A2] | [A2] | 2.5 | EP1:3-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]PROPANE-1-SULFONICACID | |||
5cs5 | [A2] | [A2] | [A2] | 1.9 | PIN:PIPERAZINE-N,N___sq___-BIS(2-ETHANESULFONIC ACID) | |||
5cs9 | [A2] | [A2] | [A2] | 2 | EDO:1,2-ETHANEDIOL MES:2-(N-MORPHOLINO)-ETHANESULFONIC ACID | |||
5csq | [A2] | [A2] | [A2] | 1.95 | MPO:3[N-MORPHOLINO]PROPANE SULFONIC ACID | |||
5ct1 | [A2] | [A2] | [A2] | 2 | NHE:2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID | |||
5ct2 | [A2] | [A2] | [A2] | 2 | CXS:3-CYCLOHEXYL-1-PROPYLSULFONIC ACID | |||
5ct3 | [A2] | [A2] | [A2] | 2 | 54O:3-HYDROXYPROPANE-1-SULFONIC ACID | |||
5fws | [A2] | [A2] | [A2] | 1.9 | CA:CALCIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE SO4:SULFATE ION | |||
5fwt | [A2] | [A2] | [A2] | 2.1 | CA:CALCIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE PO4:PHOSPHATE ION | |||
5fwu | [A] | [A] | [A] | 2.8 | CL:CHLORIDE ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
5fwv | [A2] | [A2] | [A2] | 3.2 | CL:CHLORIDE ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
5fww | [ABC] | [ABC] | [ABC] | 3.5 | CA:CALCIUM ION | |||
5hpg | [A2] | [A2] | [A2] | 1.66 | ||||
5z55 | [A] | [A] | [A] | NOTAPPLICABLE. | ||||
6ba5 | [ABC] | [ABC] | [ABC] | 1.62 | ||||
6ban | [ABC] | [ABC] | [ABC] | 1.95 | ||||
6dcm | [A] | [A] | [A] | 1.03 | ACA:6-AMINOHEXANOIC ACID |
*Chain Formula of OLIGAMI.
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA